By:Sakshi Kashyap
Updated on:Dec 06, 2025
Category:NGO
:597
The Government of India actively supports NGOs working in health, hygiene, and sanitation through several major initiatives. One of the most popular and impactful government schemes that funds NGOs working in health and sanitation is the
Ministry of Ayush, which was formed on November 9, 2014. Other notable government-backed funding sources include the National Health Mission (NHM), which supports healthcare delivery, maternal and child health, and disease control (including HIV/AIDS and TB)
Thirdly, the Swachh Bharat Mission focused on sanitation, waste management, and hygiene awareness, and the Indian Council of Medical Research (ICMR) grants, which fund health research projects by NGOs and institutions.
Additionally, Corporate Social Responsibility (CSR) under the Companies Act ensures corporate contributions to public health and sanitation programs, making it another significant funding avenue for NGOs.
With over ₹1.5 lakh crore invested through CSR and government schemes combined, NGOs have huge opportunities to scale their impact. Understanding these funding mechanisms, eligibility criteria, and application processes is crucial for organizations working at the grassroots level.
The Ministry of Ayush, established in 2014, leads efforts to revive and promote India’s traditional medicine systems, including Ayurveda, Yoga, and Homoeopathy, providing vital funding to organizations working in the health and sanitation sectors.
In addition to Ayush, the National Health Mission (NHM) empowers NGOs to improve healthcare delivery, maternal and child health, and disease control, including HIV/AIDS and TB. The Swachh Bharat Mission furthers the cause of sanitation and waste management by backing initiatives that drive toilet construction, hygiene education, and safe waste disposal. The Indian Council of Medical Research (ICMR) offers grants for innovative health research by NGOs and academic institutions, helping generate new solutions for better health outcomes.
Moreover, Corporate Social Responsibility (CSR) mandates under the Indian Companies Act require large corporations to contribute part of their profits towards social welfare, with health and sanitation as priority areas.
NGOs play a vital role in driving grassroots change in these areas, and various government schemes actively support their efforts through grants and funding. This guide walks you through the top 5 government funding schemes for NGOs in health and sanitation, explaining their roles, focus areas, how you can apply, and what documents are required.
Step-by-Step Application Process:
Register on NGO Darpan: visit https://ngodarpan.gov.in and complete registration with all organizational details
Access AYUSH NGO Portal: Navigate to https://ngo.ayush.gov.in
Create Account: Register using NGO Darpan credentials
Select Scheme: Choose the appropriate Central Sector Scheme based on your project focus
Fill Application Form: Complete the detailed project proposal form, including:
Project objectives and outcomes
Target beneficiaries and geographical area
Implementation timeline
Budget breakdown
Monitoring and evaluation framework
Upload Documents: Submit all required documents (see below)
Submit Proposal: Review and submit through the integrated portal
Budget Allocation: The Union Budget for FY26 allocated ₹3,992.9 crore (14.2% increase from the previous year) to AYUSH schemes.
Budget Scale: NHM received ₹36,576 crore in the 2021-22 Union Budget, representing over 50% of India's health budget. The funding follows a 60:40 (Centre: State) ratio for general states and 90:10 for special category states.
|
Parameter |
AYUSH |
Swachh Bharat Mission |
ICMR |
National Health Mission |
CSR Funding |
|
Implementing Ministry |
Ministry of AYUSH |
Ministry of Jal Shakti (Rural) / MoHUA (Urban) |
Ministry of Health & Family Welfare (ICMR) |
Ministry of Health & Family Welfare |
Private Companies (Companies Act 2013) |
|
Primary Focus |
Traditional medicine, wellness |
Sanitation, waste management |
Health research |
Comprehensive healthcare |
Multiple (as per Schedule VII) |
|
Funding Type |
Central Sector Schemes |
Centrally Sponsored Scheme |
Research Grants |
Centrally Sponsored Scheme |
Corporate Mandatory Spending |
|
Application Mode |
Online (AYUSH NGO Portal) |
State/District Level (Offline/Online) |
Online (ePMS Portal) |
State/District Level |
Direct to Companies |
|
Fund Size Range |
₹5 lakh - ₹50 lakh per project |
₹10 lakh - ₹5 crore+ |
₹2 crore - ₹15 crore |
Varies by state allocation |
₹1 lakh - ₹10 crore+ |
|
Project Duration |
1-3 years |
1-5 years |
3-5 years |
1-3 years (renewable) |
1-3 years typically |
|
NGO Darpan Mandatory |
Yes |
Recommended |
Yes (for NGOs) |
Recommended |
Recommended |
|
CSR-1 Required |
No |
No |
No |
No |
Yes (Mandatory) |
|
12A/80G Required |
Recommended |
Not mandatory |
Not mandatory |
Not mandatory |
Highly Recommended |
|
Experience Required |
3+ years |
3-5 years |
Varies by grant type |
5+ years |
3+ years |
|
Geographic Focus |
Pan-India |
Rural & Urban India |
Pan-India (research sites) |
High-focus states prioritized |
Pan-India |
|
Fund Release Pattern |
Installments |
Through PFMS |
Annual installments |
Quarterly/Annual |
As per MOU |
|
Reporting Frequency |
Quarterly/Annual |
Monthly/Quarterly |
Quarterly/Annual |
Monthly/Quarterly |
Monthly/Quarterly |
|
Renewal Possible |
Yes |
Yes |
No (new application) |
Yes |
Yes (new projects) |
|
Processing Time |
3-6 months |
2-4 months |
4-8 months |
2-4 months |
1-6 months |
NGO Registration: Valid registration as a Trust, Society, or Section 8 Company under the respective acts
PAN Card: Permanent Account Number for financial transactions
GST Registration: Goods and Services Tax registration (if turnover exceeds threshold)
NGO Darpan: Registration on NITI Aayog's NGO Darpan portal with a unique ID
CSR-1 Registration: Mandatory for receiving CSR funds (from the MCA portal)
12A Registration: Income tax exemption under Section 12A of the Income Tax Act
80G Certificate: Enables donors to claim tax deductions on contributions
FCRA Registration: Foreign Contribution Regulation Act registration for international funding
Audited Accounts: Annual audit by a qualified Chartered Accountant or any reputable CA firm, such as NGOExperts, a certified legal NGO service provider trusted by more than 1000+ clients in India.
Clean Tax Record: Regular filing of income tax returns
PFMS Registration: Public Financial Management System registration for direct fund transfers
Bank Account: Dedicated account for project-specific funds
Securing government funding for health and sanitation NGOs requires strategic planning, meticulous documentation, and persistent follow-up. The five schemes outlined, AYUSH, Swachh Bharat Mission, ICMR, National Health Mission, and CSR funding, offer substantial opportunities for organizations committed to improving public health and hygiene in India.For precise guidance on application processes, document preparation, and compliance, contact NGOexperts. Get in touch today to unlock government funding opportunities and scale your health and sanitation initiatives seamlessly!
1. Can a newly registered NGO apply for government health funding?
Yes, most government schemes require NGOs to have a minimum track record of 3-5 years of operational experience in the relevant sector.
2. How long does it take to receive government funding after applying?
Processing times vary significantly by scheme, but usually it takes 2 to 8 months. However, it is always recommended to maintain regular follow-up and be prepared with any additional information requested.
3. Is 12A and 80G registration mandatory for receiving government grants?
No, 12A and 80G are not mandatory for most government funding schemes (AYUSH, SBM, ICMR, NHM), but they are highly recommended for CSR funding, especially.
4. Can one NGO apply to multiple government schemes simultaneously?
Yes, NGOs can and should diversify funding sources by applying to multiple schemes simultaneously. No restrictions are preventing this.
5. What are common reasons for government funding application rejection?
Understanding rejection reasons helps improve future applications. Common causes include, Incomplete or missing required documents or Expired registration.